mirror of
https://github.com/tildearrow/furnace.git
synced 2024-11-18 18:45:10 +00:00
709 lines
30 KiB
Text
709 lines
30 KiB
Text
|
\comment This is the source for the FFTW FAQ list, in
|
|||
|
\comment the Bizarre Format With No Name. It is turned into Lout
|
|||
|
\comment input, HTML, plain ASCII and an Info document by a Perl script.
|
|||
|
\comment
|
|||
|
\comment The format and scripts come from the Linux FAQ, by
|
|||
|
\comment Ian Jackson.
|
|||
|
\set brieftitle FFTW FAQ
|
|||
|
\set author <A href="http://www.fftw.org">Matteo Frigo and Steven G. Johnson</A> / <A href="mailto:fftw@fftw.org">fftw@fftw.org</A>
|
|||
|
\set authormail fftw@fftw.org
|
|||
|
\set title FFTW Frequently Asked Questions with Answers
|
|||
|
\set copyholder Matteo Frigo and Massachusetts Institute of Technology
|
|||
|
\call-html startup html.refs2
|
|||
|
\copyto ASCII
|
|||
|
FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
|
|||
|
`date '+%d %h %Y'`
|
|||
|
Matteo Frigo
|
|||
|
Steven G. Johnson
|
|||
|
<fftw@fftw.org>
|
|||
|
|
|||
|
\endcopy
|
|||
|
\copyto INFO
|
|||
|
INFO-DIR-SECTION Development
|
|||
|
START-INFO-DIR-ENTRY
|
|||
|
* FFTW FAQ: (fftw-faq). FFTW Frequently Asked Questions with Answers.
|
|||
|
END-INFO-DIR-ENTRY
|
|||
|
|
|||
|
|
|||
|
File: $prefix.info, Node: Top, Next: Question 1.1, Up: (dir)
|
|||
|
|
|||
|
FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS
|
|||
|
`date '+%d %h %Y'`
|
|||
|
Matteo Frigo
|
|||
|
Steven G. Johnson
|
|||
|
<fftw@fftw.org>
|
|||
|
|
|||
|
\endcopy
|
|||
|
|
|||
|
This is the list of Frequently Asked Questions about FFTW, a
|
|||
|
collection of fast C routines for computing the Discrete Fourier
|
|||
|
Transform in one or more dimensions.
|
|||
|
|
|||
|
\section Index
|
|||
|
|
|||
|
\index
|
|||
|
|
|||
|
\comment ######################################################################
|
|||
|
|
|||
|
\section Introduction and General Information
|
|||
|
|
|||
|
\question 26aug:whatisfftw What is FFTW?
|
|||
|
|
|||
|
FFTW is a free collection of fast C routines for computing the
|
|||
|
Discrete Fourier Transform in one or more dimensions. It includes
|
|||
|
complex, real, symmetric, and parallel transforms, and can handle
|
|||
|
arbitrary array sizes efficiently. FFTW is typically faster than
|
|||
|
other publically-available FFT implementations, and is even
|
|||
|
competitive with vendor-tuned libraries. (See our web page for
|
|||
|
extensive benchmarks.) To achieve this performance, FFTW uses novel
|
|||
|
code-generation and runtime self-optimization techniques (along with
|
|||
|
many other tricks).
|
|||
|
|
|||
|
\question 26aug:whereisfftw How do I obtain FFTW?
|
|||
|
|
|||
|
FFTW can be found at \docref{the FFTW web page\}. You can also
|
|||
|
retrieve it from \ftpon ftp.fftw.org in \ftpin /pub/fftw.
|
|||
|
|
|||
|
\question 26aug:isfftwfree Is FFTW free software?
|
|||
|
|
|||
|
Starting with version 1.3, FFTW is Free Software in the technical
|
|||
|
sense defined by the Free Software Foundation (see \docref{Categories
|
|||
|
of Free and Non-Free Software\}), and is distributed under the terms
|
|||
|
of the GNU General Public License. Previous versions of FFTW were
|
|||
|
distributed without fee for noncommercial use, but were not
|
|||
|
technically ``free.''
|
|||
|
|
|||
|
Non-free licenses for FFTW are also available that permit different
|
|||
|
terms of use than the GPL.
|
|||
|
|
|||
|
\question 10apr:nonfree What is this about non-free licenses?
|
|||
|
|
|||
|
The non-free licenses are for companies that wish to use FFTW in their
|
|||
|
products but are unwilling to release their software under the GPL
|
|||
|
(which would require them to release source code and allow free
|
|||
|
redistribution). Such users can purchase an unlimited-use license
|
|||
|
from MIT. Contact us for more details.
|
|||
|
|
|||
|
We could instead have released FFTW under the LGPL, or even disallowed
|
|||
|
non-Free usage. Suffice it to say, however, that MIT owns the
|
|||
|
copyright to FFTW and they only let us GPL it because we convinced
|
|||
|
them that it would neither affect their licensing revenue nor irritate
|
|||
|
existing licensees.
|
|||
|
|
|||
|
\question 24oct:west In the West? I thought MIT was in the East?
|
|||
|
|
|||
|
Not to an Italian. You could say that we're a Spaghetti Western
|
|||
|
(with apologies to Sergio Leone).
|
|||
|
|
|||
|
\comment ######################################################################
|
|||
|
|
|||
|
\section Installing FFTW
|
|||
|
|
|||
|
\question 26aug:systems Which systems does FFTW run on?
|
|||
|
|
|||
|
FFTW is written in ANSI C, and should work on any system with a decent
|
|||
|
C compiler. (See also \qref runOnWindows, \qref compilerCrashes.)
|
|||
|
FFTW can also take advantage of certain hardware-specific features,
|
|||
|
such as cycle counters and SIMD instructions, but this is optional.
|
|||
|
|
|||
|
\question 26aug:runOnWindows Does FFTW run on Windows?
|
|||
|
|
|||
|
Yes, many people have reported successfully using FFTW on Windows with
|
|||
|
various compilers. FFTW was not developed on Windows, but the source
|
|||
|
code is essentially straight ANSI C. See also the \docref{FFTW
|
|||
|
Windows installation notes\}, \qref compilerCrashes, and \qref
|
|||
|
vbetalia.
|
|||
|
|
|||
|
\question 26aug:compilerCrashes My compiler has trouble with FFTW.
|
|||
|
|
|||
|
Complain fiercely to the vendor of the compiler.
|
|||
|
|
|||
|
We have successfully used \courier{gcc\} 3.2.x on x86 and PPC, a
|
|||
|
recent Compaq C compiler for Alpha, version 6 of IBM's \courier{xlc\}
|
|||
|
compiler for AIX, Intel's \courier{icc\} versions 5-7, and Sun
|
|||
|
WorkShop \courier{cc\} version 6.
|
|||
|
|
|||
|
FFTW is likely to push compilers to their limits, however, and several
|
|||
|
compiler bugs have been exposed by FFTW. A partial list follows.
|
|||
|
|
|||
|
\courier{gcc\} 2.95.x for Solaris/SPARC produces incorrect code for
|
|||
|
the test program (workaround: recompile the \courier{libbench2\}
|
|||
|
directory with \courier{-O2\}).
|
|||
|
|
|||
|
NetBSD/macppc 1.6 comes with a \courier{gcc\} version that also
|
|||
|
miscompiles the test program. (Please report a workaround if you know
|
|||
|
one.)
|
|||
|
|
|||
|
\courier{gcc\} 3.2.3 for ARM reportedly crashes during compilation.
|
|||
|
This bug is reportedly fixed in later versions of \courier{gcc\}.
|
|||
|
|
|||
|
Versions 8.0 and 8.1 of Intel's \courier{icc\} falsely claim to be
|
|||
|
\courier{gcc\}, so you should specify \courier{CC="icc -no-gcc"\};
|
|||
|
this is automatic in FFTW 3.1. \courier{icc-8.0.066\} reportely
|
|||
|
produces incorrect code for FFTW 2.1.5, but is fixed in version 8.1.
|
|||
|
\courier{icc-7.1\} compiler build 20030402Z appears to produce
|
|||
|
incorrect dependencies, causing the compilation to fail.
|
|||
|
\courier{icc-7.1\} build 20030307Z appears to work fine. (Use
|
|||
|
\courier{icc -V\} to check which build you have.) As of 2003/04/18,
|
|||
|
build 20030402Z appears not to be available any longer on Intel's
|
|||
|
website, whereas the older build 20030307Z is available.
|
|||
|
|
|||
|
\courier{ranlib\} of GNU \courier{binutils\} 2.9.1 on Irix has been
|
|||
|
observed to corrupt the FFTW libraries, causing a link failure when
|
|||
|
FFTW is compiled. Since \courier{ranlib\} is completely superfluous
|
|||
|
on Irix, we suggest deleting it from your system and replacing it with
|
|||
|
a symbolic link to \courier{/bin/echo\}.
|
|||
|
|
|||
|
If support for SIMD instructions is enabled in FFTW, further compiler
|
|||
|
problems may appear:
|
|||
|
|
|||
|
\courier{gcc\} 3.4.[0123] for x86 produces incorrect SSE2 code for
|
|||
|
FFTW when \courier{-O2\} (the best choice for FFTW) is used, causing
|
|||
|
FFTW to crash (\courier{make check\} crashes). This bug is fixed in
|
|||
|
\courier{gcc\} 3.4.4. On x86_64 (amd64/em64t), \courier{gcc\} 3.4.4
|
|||
|
reportedly still has a similar problem, but this is fixed as of
|
|||
|
\courier{gcc\} 3.4.6.
|
|||
|
|
|||
|
\courier{gcc-3.2\} for x86 produces incorrect SIMD code if
|
|||
|
\courier{-O3\} is used. The same compiler produces incorrect SIMD
|
|||
|
code if no optimization is used, too. When using \courier{gcc-3.2\},
|
|||
|
it is a good idea not to change the default \courier{CFLAGS\} selected
|
|||
|
by the \courier{configure\} script.
|
|||
|
|
|||
|
Some 3.0.x and 3.1.x versions of \courier{gcc\} on \courier{x86\} may
|
|||
|
crash. \courier{gcc\} so-called 2.96 shipping with RedHat 7.3 crashes
|
|||
|
when compiling SIMD code. In both cases, please upgrade to
|
|||
|
\courier{gcc-3.2\} or later.
|
|||
|
|
|||
|
Intel's \courier{icc\} 6.0 misaligns SSE constants, but FFTW has a
|
|||
|
workaround. \courier{icc\} 8.x fails to compile FFTW 3.0.x because it
|
|||
|
falsely claims to be \courier{gcc\}; we believe this to be a bug in
|
|||
|
\courier{icc\}, but FFTW 3.1 has a workaround.
|
|||
|
|
|||
|
Visual C++ 2003 reportedly produces incorrect code for SSE/SSE2 when
|
|||
|
compiling FFTW. This bug was reportedly fixed in VC++ 2005;
|
|||
|
alternatively, you could switch to the Intel compiler. VC++ 6.0 also
|
|||
|
reportedly produces incorrect code for the file
|
|||
|
\courier{reodft11e-r2hc-odd.c\} unless optimizations are disabled for
|
|||
|
that file.
|
|||
|
|
|||
|
\courier{gcc\} 2.95 on MacOS X miscompiles AltiVec code (fixed in
|
|||
|
later versions). \courier{gcc\} 3.2.x miscompiles AltiVec
|
|||
|
permutations, but FFTW has a workaround. \courier{gcc\} 4.0.1 on
|
|||
|
MacOS for Intel crashes when compiling FFTW; a workaround is to
|
|||
|
compile one file without optimization: \courier{cd kernel; make
|
|||
|
CFLAGS=" " trig.lo\}.
|
|||
|
|
|||
|
\courier{gcc\} 4.1.1 reportedly crashes when compiling FFTW for MIPS;
|
|||
|
the workaround is to compile the file it crashes on
|
|||
|
(\courier{t2_64.c\}) with a lower optimization level.
|
|||
|
|
|||
|
\courier{gcc\} versions 4.1.2 to 4.2.0 for x86 reportedly miscompile
|
|||
|
FFTW 3.1's test program, causing \courier{make check\} to crash
|
|||
|
(\courier{gcc\} bug #26528). The bug was reportedly fixed in
|
|||
|
\courier{gcc\} version 4.2.1 and later. A workaround is to compile
|
|||
|
\courier{libbench2/verify-lib.c\} without optimization.
|
|||
|
|
|||
|
\question 26aug:solarisSucks FFTW does not compile on Solaris, complaining about \courier{const\}.
|
|||
|
|
|||
|
We know that at least on Solaris 2.5.x with Sun's compilers 4.2 you
|
|||
|
might get error messages from \courier{make\} such as
|
|||
|
|
|||
|
\courier{"./fftw.h", line 88: warning: const is a keyword in ANSI C\}
|
|||
|
|
|||
|
This is the case when the \courier{configure\} script reports that
|
|||
|
\courier{const\} does not work:
|
|||
|
|
|||
|
\courier{checking for working const... (cached) no\}
|
|||
|
|
|||
|
You should be aware that Solaris comes with two compilers, namely,
|
|||
|
\courier{/opt/SUNWspro/SC4.2/bin/cc\} and \courier{/usr/ucb/cc\}. The
|
|||
|
latter compiler is non-ANSI. Indeed, it is a perverse shell script
|
|||
|
that calls the real compiler in non-ANSI mode. In order
|
|||
|
to compile FFTW, change your path so that the right \courier{cc\}
|
|||
|
is used.
|
|||
|
|
|||
|
To know whether your compiler is the right one, type
|
|||
|
\courier{cc -V\}. If the compiler prints ``\courier{ucbcc\}'',
|
|||
|
as in
|
|||
|
|
|||
|
\courier{ucbcc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
|
|||
|
|
|||
|
then the compiler is wrong. The right message is something like
|
|||
|
|
|||
|
\courier{cc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\}
|
|||
|
|
|||
|
\question 19mar:3dnow What's the difference between \courier{--enable-3dnow\} and \courier{--enable-k7\}?
|
|||
|
|
|||
|
\courier{--enable-k7\} enables 3DNow! instructions on K7 processors
|
|||
|
(AMD Athlon and its variants). K7 support is provided by assembly
|
|||
|
routines generated by a special purpose compiler.
|
|||
|
As of fftw-3.2, --enable-k7 is no longer supported.
|
|||
|
|
|||
|
\courier{--enable-3dnow\} enables generic 3DNow! support using
|
|||
|
\courier{gcc\} builtin functions. This works on earlier AMD
|
|||
|
processors, but it is not as fast as our special assembly routines.
|
|||
|
As of fftw-3.1, --enable-3dnow is no longer supported.
|
|||
|
|
|||
|
\question 18apr:fma What's the difference between the fma and the non-fma versions?
|
|||
|
|
|||
|
The fma version tries to exploit the fused multiply-add instructions
|
|||
|
implemented in many processors such as PowerPC, ia-64, and MIPS. The
|
|||
|
two FFTW packages are otherwise identical. In FFTW 3.1, the fma and
|
|||
|
non-fma versions were merged together into a single package, and the
|
|||
|
\courier{configure\} script attempts to automatically guess which
|
|||
|
version to use.
|
|||
|
|
|||
|
The FFTW 3.1 \courier{configure\} script enables fma by default on
|
|||
|
PowerPC, Itanium, and PA-RISC, and disables it otherwise. You can
|
|||
|
force one or the other by using the \courier{--enable-fma\} or
|
|||
|
\courier{--disable-fma\} flag for \courier{configure\}.
|
|||
|
|
|||
|
Definitely use fma if you have a PowerPC-based system with
|
|||
|
\courier{gcc\} (or IBM \courier{xlc\}). This includes all GNU/Linux
|
|||
|
systems for PowerPC and the older PowerPC-based MacOS systems. Also
|
|||
|
use it on PA-RISC and Itanium with the HP/UX compiler.
|
|||
|
|
|||
|
Definitely do not use the fma version if you have an ia-32 processor
|
|||
|
(Intel, AMD, MacOS on Intel, etcetera).
|
|||
|
|
|||
|
For other architectures/compilers, the situation is not so clear. For
|
|||
|
example, ia-64 has the fma instruction, but \courier{gcc-3.2\} appears
|
|||
|
not to exploit it correctly. Other compilers may do the right thing,
|
|||
|
but we have not tried them. Please send us your feedback so that we
|
|||
|
can update this FAQ entry.
|
|||
|
|
|||
|
\question 26aug:languages Which language is FFTW written in?
|
|||
|
|
|||
|
FFTW is written in ANSI C. Most of the code, however, was
|
|||
|
automatically generated by a program called \courier{genfft\}, written
|
|||
|
in the Objective Caml dialect of ML. You do not need to know ML or to
|
|||
|
have an Objective Caml compiler in order to use FFTW.
|
|||
|
|
|||
|
\courier{genfft\} is provided with the FFTW sources, which means that
|
|||
|
you can play with the code generator if you want. In this case, you
|
|||
|
need a working Objective Caml system. Objective Caml is available
|
|||
|
from \docref{the Caml web page\}.
|
|||
|
|
|||
|
\question 26aug:fortran Can I call FFTW from Fortran?
|
|||
|
|
|||
|
Yes, FFTW (versions 1.3 and higher) contains a Fortran-callable
|
|||
|
interface, documented in the FFTW manual.
|
|||
|
|
|||
|
By default, FFTW configures its Fortran interface to work with the
|
|||
|
first compiler it finds, e.g. \courier{g77\}. To configure for a
|
|||
|
different, incompatible Fortran compiler \courier{foobar\}, use
|
|||
|
\courier{./configure F77=foobar\} when installing FFTW. (In the case
|
|||
|
of \courier{g77\}, however, FFTW 3.x also includes an extra set of
|
|||
|
Fortran-callable routines with one less underscore at the end of
|
|||
|
identifiers, which should cover most other Fortran compilers on Linux
|
|||
|
at least.)
|
|||
|
|
|||
|
\question 26aug:cplusplus Can I call FFTW from C++?
|
|||
|
|
|||
|
Most definitely. FFTW should compile and/or link under any C++
|
|||
|
compiler. Moreover, it is likely that the C++ \courier{<complex>\}
|
|||
|
template class is bit-compatible with FFTW's complex-number format
|
|||
|
(see the FFTW manual for more details).
|
|||
|
|
|||
|
\question 26aug:whynotfortran Why isn't FFTW written in Fortran/C++?
|
|||
|
|
|||
|
Because we don't like those languages, and neither approaches the
|
|||
|
portability of C.
|
|||
|
|
|||
|
\question 29mar:singleprec How do I compile FFTW to run in single precision?
|
|||
|
|
|||
|
On a Unix system: \courier{configure --enable-float\}. On a non-Unix
|
|||
|
system: edit \courier{config.h\} to \courier{#define\} the symbol
|
|||
|
\courier{FFTW_SINGLE\} (for FFTW 3.x). In both cases, you must then
|
|||
|
recompile FFTW. In FFTW 3, all FFTW identifiers will then begin with
|
|||
|
\courier{fftwf_\} instead of \courier{fftw_\}.
|
|||
|
|
|||
|
\question 28mar:64bitk7 --enable-k7 does not work on x86-64
|
|||
|
|
|||
|
Support for --enable-k7 was discontinued in fftw-3.2.
|
|||
|
|
|||
|
The fftw-3.1 release supports --enable-k7. This option only works on
|
|||
|
32-bit x86 machines that implement 3DNow!, including the AMD Athlon
|
|||
|
and the AMD Opteron in 32-bit mode. --enable-k7 does not work on AMD
|
|||
|
Opteron in 64-bit mode. Use --enable-sse for x86-64 machines.
|
|||
|
|
|||
|
FFTW supports 3DNow! by means of assembly code generated by a
|
|||
|
special-purpose compiler. It is hard to produce assembly code that
|
|||
|
works in both 32-bit and 64-bit mode.
|
|||
|
|
|||
|
\comment ######################################################################
|
|||
|
|
|||
|
\section Using FFTW
|
|||
|
|
|||
|
\question 15mar:fftw2to3 Why not support the FFTW 2 interface in FFTW 3?
|
|||
|
|
|||
|
FFTW 3 has semantics incompatible with earlier versions: its plans can
|
|||
|
only be used for a given stride, multiplicity, and other
|
|||
|
characteristics of the input and output arrays; these stronger
|
|||
|
semantics are necessary for performance reasons. Thus, it is
|
|||
|
impossible to efficiently emulate the older interface (whose plans can
|
|||
|
be used for any transform of the same size). We believe that it
|
|||
|
should be possible to upgrade most programs without any difficulty,
|
|||
|
however.
|
|||
|
|
|||
|
\question 20mar:planperarray Why do FFTW 3 plans encapsulate the input/output arrays and not just the algorithm?
|
|||
|
|
|||
|
There are several reasons:
|
|||
|
|
|||
|
\call startlist
|
|||
|
\call item
|
|||
|
It was important for performance reasons that the plan be specific to
|
|||
|
array characteristics like the stride (and alignment, for SIMD), and
|
|||
|
requiring that the user maintain these invariants is error prone.
|
|||
|
\call item
|
|||
|
In most high-performance applications, as far as we can tell, you are
|
|||
|
usually transforming the same array over and over, so FFTW's semantics
|
|||
|
should not be a burden.
|
|||
|
\call item
|
|||
|
If you need to transform another array of the same size, creating a
|
|||
|
new plan once the first exists is a cheap operation.
|
|||
|
\call item
|
|||
|
If you need to transform many arrays of the same size at once, you
|
|||
|
should really use the \courier{plan_many\} routines in FFTW's "advanced"
|
|||
|
interface.
|
|||
|
\call item
|
|||
|
If the abovementioned array characteristics are the same, you are
|
|||
|
willing to pay close attention to the documentation, and you really
|
|||
|
need to, we provide a "new-array execution" interface to apply a plan
|
|||
|
to a new array.
|
|||
|
\call endlist
|
|||
|
|
|||
|
\question 25may:slow FFTW seems really slow.
|
|||
|
|
|||
|
You are probably recreating the plan before every transform, rather
|
|||
|
than creating it once and reusing it for all transforms of the same
|
|||
|
size. FFTW is designed to be used in the following way:
|
|||
|
|
|||
|
\call startlist
|
|||
|
\call item
|
|||
|
First, you create a plan. This will take several seconds.
|
|||
|
\call item
|
|||
|
Then, you reuse the plan many times to perform FFTs. These are fast.
|
|||
|
\call endlist
|
|||
|
|
|||
|
If you don't need to compute many transforms and the time for the
|
|||
|
planner is significant, you have two options. First, you can use the
|
|||
|
\courier{FFTW_ESTIMATE\} option in the planner, which uses heuristics
|
|||
|
instead of runtime measurements and produces a good plan in a short
|
|||
|
time. Second, you can use the wisdom feature to precompute the plan;
|
|||
|
see \qref savePlans
|
|||
|
|
|||
|
\question 22oct:slows FFTW slows down after repeated calls.
|
|||
|
|
|||
|
Probably, NaNs or similar are creeping into your data, and the
|
|||
|
slowdown is due to the resulting floating-point exceptions. For
|
|||
|
example, be aware that repeatedly FFTing the same array is a diverging
|
|||
|
process (because FFTW computes the unnormalized transform).
|
|||
|
|
|||
|
\question 22oct:segfault An FFTW routine is crashing when I call it.
|
|||
|
|
|||
|
Did the FFTW test programs pass (\courier{make check\}, or \courier{cd
|
|||
|
tests; make bigcheck\} if you want to be paranoid)? If so, you almost
|
|||
|
certainly have a bug in your own code. For example, you could be
|
|||
|
passing invalid arguments (such as wrongly-sized arrays) to FFTW, or
|
|||
|
you could simply have memory corruption elsewhere in your program that
|
|||
|
causes random crashes later on. Please don't complain to us unless
|
|||
|
you can come up with a minimal self-contained program (preferably
|
|||
|
under 30 lines) that illustrates the problem.
|
|||
|
|
|||
|
\question 22oct:fortran64 My Fortran program crashes when calling FFTW.
|
|||
|
|
|||
|
As described in the manual, on 64-bit machines you must store the
|
|||
|
plans in variables large enough to hold a pointer, for example
|
|||
|
\courier{integer*8\}. We recommend using \courier{integer*8\} on
|
|||
|
32-bit machines as well, to simplify porting.
|
|||
|
|
|||
|
\question 24mar:conventions FFTW gives results different from my old FFT.
|
|||
|
|
|||
|
People follow many different conventions for the DFT, and you should
|
|||
|
be sure to know the ones that we use (described in the FFTW manual).
|
|||
|
In particular, you should be aware that the
|
|||
|
\courier{FFTW_FORWARD\}/\courier{FFTW_BACKWARD\} directions correspond
|
|||
|
to signs of -1/+1 in the exponent of the DFT definition.
|
|||
|
(\italic{Numerical Recipes\} uses the opposite convention.)
|
|||
|
|
|||
|
You should also know that we compute an unnormalized transform. In
|
|||
|
contrast, Matlab is an example of program that computes a normalized
|
|||
|
transform. See \qref whyscaled.
|
|||
|
|
|||
|
Finally, note that floating-point arithmetic is not exact, so
|
|||
|
different FFT algorithms will give slightly different results (on the
|
|||
|
order of the numerical accuracy; typically a fractional difference of
|
|||
|
1e-15 or so in double precision).
|
|||
|
|
|||
|
\question 31aug:nondeterministic FFTW gives different results between runs
|
|||
|
|
|||
|
If you use \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} mode,
|
|||
|
then the algorithm FFTW employs is not deterministic: it depends on
|
|||
|
runtime performance measurements. This will cause the results to vary
|
|||
|
slightly from run to run. However, the differences should be slight,
|
|||
|
on the order of the floating-point precision, and therefore should
|
|||
|
have no practical impact on most applications.
|
|||
|
|
|||
|
If you use saved plans (wisdom) or \courier{FFTW_ESTIMATE\} mode,
|
|||
|
however, then the algorithm is deterministic and the results should be
|
|||
|
identical between runs.
|
|||
|
|
|||
|
\question 26aug:savePlans Can I save FFTW's plans?
|
|||
|
|
|||
|
Yes. Starting with version 1.2, FFTW provides the \courier{wisdom\}
|
|||
|
mechanism for saving plans; see the FFTW manual.
|
|||
|
|
|||
|
\question 14sep:whyscaled Why does your inverse transform return a scaled result?
|
|||
|
|
|||
|
Computing the forward transform followed by the backward transform (or
|
|||
|
vice versa) yields the original array scaled by the size of the array.
|
|||
|
(For multi-dimensional transforms, the size of the array is the
|
|||
|
product of the dimensions.) We could, instead, have chosen a
|
|||
|
normalization that would have returned the unscaled array. Or, to
|
|||
|
accomodate the many conventions in this matter, the transform routines
|
|||
|
could have accepted a "scale factor" parameter. We did not do this,
|
|||
|
however, for two reasons. First, we didn't want to sacrifice
|
|||
|
performance in the common case where the scale factor is 1. Second, in
|
|||
|
real applications the FFT is followed or preceded by some computation
|
|||
|
on the data, into which the scale factor can typically be absorbed at
|
|||
|
little or no cost.
|
|||
|
|
|||
|
\question 02dec:centerorigin How can I make FFTW put the origin (zero frequency) at the center of its output?
|
|||
|
|
|||
|
For human viewing of a spectrum, it is often convenient to put the
|
|||
|
origin in frequency space at the center of the output array, rather
|
|||
|
than in the zero-th element (the default in FFTW). If all of the
|
|||
|
dimensions of your array are even, you can accomplish this by simply
|
|||
|
multiplying each element of the input array by (-1)^(i + j + ...),
|
|||
|
where i, j, etcetera are the indices of the element. (This trick is a
|
|||
|
general property of the DFT, and is not specific to FFTW.)
|
|||
|
|
|||
|
\question 08may:imageaudio How do I FFT an image/audio file in \italic{foobar\} format?
|
|||
|
|
|||
|
FFTW performs an FFT on an array of floating-point values. You can
|
|||
|
certainly use it to compute the transform of an image or audio stream,
|
|||
|
but you are responsible for figuring out your data format and
|
|||
|
converting it to the form FFTW requires.
|
|||
|
|
|||
|
\question 09apr:linkfails My program does not link (on Unix).
|
|||
|
|
|||
|
The libraries must be listed in the correct order (\courier{-lfftw3
|
|||
|
-lm\} for FFTW 3.x) and \italic{after\} your program sources/objects.
|
|||
|
(The general rule is that if \italic{A\} uses \italic{B\}, then
|
|||
|
\italic{A\} must be listed before \italic{B\} in the link command.).
|
|||
|
|
|||
|
\question 15mar:linkheader I included your header, but linking still fails.
|
|||
|
|
|||
|
You're a C++ programmer, aren't you? You have to compile the FFTW
|
|||
|
library and link it into your program, not just \courier{#include
|
|||
|
<fftw3.h>\}. (Yes, this is really a FAQ.)
|
|||
|
|
|||
|
\question 22oct:nostack My program crashes, complaining about stack space.
|
|||
|
|
|||
|
You cannot declare large arrays with automatic storage (e.g. via
|
|||
|
\courier{fftw_complex array[N]\}); you should use
|
|||
|
\courier{fftw_malloc\} (or equivalent) to allocate the arrays you want
|
|||
|
to transform if they are larger than a few hundred elements.
|
|||
|
|
|||
|
\question 13may:leaks FFTW seems to have a memory leak.
|
|||
|
|
|||
|
After you create a plan, FFTW caches the information required to
|
|||
|
quickly recreate the plan. (See \qref savePlans) It also maintains a
|
|||
|
small amount of other persistent memory. You can deallocate all of
|
|||
|
FFTW's internally allocated memory, if you wish, by calling
|
|||
|
\courier{fftw_cleanup()\}, as documented in the manual.
|
|||
|
|
|||
|
\question 16may:allzero The output of FFTW's transform is all zeros.
|
|||
|
|
|||
|
You should initialize your input array \italic{after\} creating the
|
|||
|
plan, unless you use \courier{FFTW_ESTIMATE\}: planning with
|
|||
|
\courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} overwrites the
|
|||
|
input/output arrays, as described in the manual.
|
|||
|
|
|||
|
\question 05sep:vbetalia How do I call FFTW from the Microsoft language du jour?
|
|||
|
|
|||
|
Please \italic{do not\} ask us Windows-specific questions. We do not
|
|||
|
use Windows. We know nothing about Visual Basic, Visual C++, or .NET.
|
|||
|
Please find the appropriate Usenet discussion group and ask your
|
|||
|
question there. See also \qref runOnWindows.
|
|||
|
|
|||
|
\question 15oct:pruned Can I compute only a subset of the DFT outputs?
|
|||
|
|
|||
|
In general, no, an FFT intrinsically computes all outputs from all
|
|||
|
inputs. In principle, there is something called a \italic{pruned
|
|||
|
FFT\} that can do what you want, but to compute K outputs out of N the
|
|||
|
complexity is in general O(N log K) instead of O(N log N), thus saving
|
|||
|
only a small additive factor in the log. (The same argument holds if
|
|||
|
you instead have only K nonzero inputs.)
|
|||
|
|
|||
|
There are some specific cases in which you can get the O(N log K)
|
|||
|
performance benefits easily, however, by combining a few ordinary
|
|||
|
FFTs. In particular, the case where you want the first K outputs,
|
|||
|
where K divides N, can be handled by performing N/K transforms of size
|
|||
|
K and then summing the outputs multiplied by appropriate phase
|
|||
|
factors. For more details, see \docref{pruned FFTs with FFTW\}.
|
|||
|
|
|||
|
There are also some algorithms that compute pruned transforms
|
|||
|
\italic{approximately\}, but they are beyond the scope of this FAQ.
|
|||
|
|
|||
|
\question 21jan:transpose Can I use FFTW's routines for in-place and out-of-place matrix transposition?
|
|||
|
|
|||
|
You can use the FFTW guru interface to create a rank-0 transform of
|
|||
|
vector rank 2 where the vector strides are transposed. (A rank-0
|
|||
|
transform is equivalent to a 1D transform of size 1, which. just
|
|||
|
copies the input into the output.) Specifying the same location for
|
|||
|
the input and output makes the transpose in-place.
|
|||
|
|
|||
|
For double-valued data stored in row-major format, plan creation looks like
|
|||
|
this:
|
|||
|
|
|||
|
\verbatim
|
|||
|
fftw_plan plan_transpose(int rows, int cols, double *in, double *out)
|
|||
|
{
|
|||
|
const unsigned flags = FFTW_ESTIMATE; /* other flags are possible */
|
|||
|
fftw_iodim howmany_dims[2];
|
|||
|
|
|||
|
howmany_dims[0].n = rows;
|
|||
|
howmany_dims[0].is = cols;
|
|||
|
howmany_dims[0].os = 1;
|
|||
|
|
|||
|
howmany_dims[1].n = cols;
|
|||
|
howmany_dims[1].is = 1;
|
|||
|
howmany_dims[1].os = rows;
|
|||
|
|
|||
|
return fftw_plan_guru_r2r(/*rank=*/ 0, /*dims=*/ NULL,
|
|||
|
/*howmany_rank=*/ 2, howmany_dims,
|
|||
|
in, out, /*kind=*/ NULL, flags);
|
|||
|
}
|
|||
|
\endverbatim
|
|||
|
|
|||
|
(This entry was written by Rhys Ulerich.)
|
|||
|
|
|||
|
\comment ######################################################################
|
|||
|
|
|||
|
\section Internals of FFTW
|
|||
|
|
|||
|
\question 26aug:howworks How does FFTW work?
|
|||
|
|
|||
|
The innovation (if it can be so called) in FFTW consists in having a
|
|||
|
variety of composable \italic{solvers\}, representing different FFT
|
|||
|
algorithms and implementation strategies, whose combination into a
|
|||
|
particular \italic{plan\} for a given size can be determined at
|
|||
|
runtime according to the characteristics of your machine/compiler.
|
|||
|
This peculiar software architecture allows FFTW to adapt itself to
|
|||
|
almost any machine.
|
|||
|
|
|||
|
For more details (albeit somewhat outdated), see the paper "FFTW: An
|
|||
|
Adaptive Software Architecture for the FFT", by M. Frigo and
|
|||
|
S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998), also
|
|||
|
available at \docref{the FFTW web page\}.
|
|||
|
|
|||
|
\question 26aug:whyfast Why is FFTW so fast?
|
|||
|
|
|||
|
This is a complex question, and there is no simple answer. In fact,
|
|||
|
the authors do not fully know the answer, either. In addition to many
|
|||
|
small performance hacks throughout FFTW, there are three general
|
|||
|
reasons for FFTW's speed.
|
|||
|
|
|||
|
\call startlist
|
|||
|
\call item
|
|||
|
FFTW uses a variety of FFT algorithms and implementation styles
|
|||
|
that can be arbitrarily composed to adapt itself to
|
|||
|
a machine. See \qref howworks.
|
|||
|
\call item
|
|||
|
FFTW uses a code generator to produce highly-optimized
|
|||
|
routines for computing small transforms.
|
|||
|
\call item
|
|||
|
FFTW uses explicit divide-and-conquer to take advantage
|
|||
|
of the memory hierarchy.
|
|||
|
\call endlist
|
|||
|
|
|||
|
For more details (albeit somewhat outdated), see the paper "FFTW: An
|
|||
|
Adaptive Software Architecture for the FFT", by M. Frigo and
|
|||
|
S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998),
|
|||
|
available along with other references at \docref{the FFTW web page\}.
|
|||
|
|
|||
|
\comment ######################################################################
|
|||
|
|
|||
|
\section Known bugs
|
|||
|
|
|||
|
\question 27aug:rfftwndbug FFTW 1.1 crashes in rfftwnd on Linux.
|
|||
|
|
|||
|
This bug was fixed in FFTW 1.2. There was a bug in \courier{rfftwnd\}
|
|||
|
causing an incorrect amount of memory to be allocated. The bug showed
|
|||
|
up in Linux with libc-5.3.12 (and nowhere else that we know of).
|
|||
|
|
|||
|
\question 15oct:fftwmpibug The MPI transforms in FFTW 1.2 give incorrect results/leak memory.
|
|||
|
|
|||
|
These bugs were corrected in FFTW 1.2.1. The MPI transforms (really,
|
|||
|
just the transpose routines) in FFTW 1.2 had bugs that could cause
|
|||
|
errors in some situations.
|
|||
|
|
|||
|
\question 05nov:testsingbug The test programs in FFTW 1.2.1 fail when I change FFTW to use single precision.
|
|||
|
|
|||
|
This bug was fixed in FFTW 1.3. (Older versions of FFTW did
|
|||
|
work in single precision, but the test programs didn't--the error
|
|||
|
tolerances in the tests were set for double precision.)
|
|||
|
|
|||
|
\question 24mar:teststoobig The test program in FFTW 1.2.1 fails for n > 46340.
|
|||
|
|
|||
|
This bug was fixed in FFTW 1.3. FFTW 1.2.1 produced the right answer,
|
|||
|
but the test program was wrong. For large n, n*n in the naive
|
|||
|
transform that we used for comparison overflows 32 bit integer
|
|||
|
precision, breaking the test.
|
|||
|
|
|||
|
\question 24aug:linuxthreads The threaded code fails on Linux Redhat 5.0
|
|||
|
|
|||
|
We had problems with glibc-2.0.5. The code should work with
|
|||
|
glibc-2.0.7.
|
|||
|
|
|||
|
\question 26sep:bigrfftwnd FFTW 2.0's rfftwnd fails for rank > 1 transforms with a final dimension >= 65536.
|
|||
|
|
|||
|
This bug was fixed in FFTW 2.0.1. (There was a 32-bit integer overflow due
|
|||
|
to a poorly-parenthesized expression.)
|
|||
|
|
|||
|
\question 26mar:primebug FFTW 2.0's complex transforms give the wrong results with prime factors 17 to 97.
|
|||
|
|
|||
|
There was a bug in the complex transforms that could cause incorrect
|
|||
|
results under (hopefully rare) circumstances for lengths with
|
|||
|
intermediate-size prime factors (17-97). This bug was fixed in FFTW
|
|||
|
2.1.1.
|
|||
|
|
|||
|
\question 05apr:mpichbug FFTW 2.1.1's MPI test programs crash with MPICH.
|
|||
|
|
|||
|
This bug was fixed in FFTW 2.1.2. The 2.1/2.1.1 MPI test programs crashed
|
|||
|
when using the MPICH implementation of MPI with the \courier{ch_p4\}
|
|||
|
device (TCP/IP); the transforms themselves worked fine.
|
|||
|
|
|||
|
\question 25may:aixthreadbug FFTW 2.1.2's multi-threaded transforms don't work on AIX.
|
|||
|
|
|||
|
This bug was fixed in FFTW 2.1.3. The multi-threaded transforms in
|
|||
|
previous versions didn't work with AIX's \courier{pthreads\}
|
|||
|
implementation, which idiosyncratically creates threads in detached
|
|||
|
(non-joinable) mode by default.
|
|||
|
|
|||
|
\question 27sep:bigprimebug FFTW 2.1.2's complex transforms give incorrect results for large prime sizes.
|
|||
|
|
|||
|
This bug was fixed in FFTW 2.1.3. FFTW's complex-transform algorithm
|
|||
|
for prime sizes (in versions 2.0 to 2.1.2) had an integer overflow
|
|||
|
problem that caused incorrect results for many primes greater than
|
|||
|
32768 (on 32-bit machines). (Sizes without large prime factors are
|
|||
|
not affected.)
|
|||
|
|
|||
|
\question 25may:solaristhreadbug FFTW 2.1.3's multi-threaded transforms don't give any speedup on Solaris.
|
|||
|
|
|||
|
This bug was fixed in FFTW 2.1.4. (By default, Solaris creates
|
|||
|
threads that do not parallelize over multiple processors, so one has
|
|||
|
to request the proper behavior specifically.)
|
|||
|
|
|||
|
\question 03may:aixflags FFTW 2.1.3 crashes on AIX.
|
|||
|
|
|||
|
The FFTW 2.1.3 \courier{configure\} script picked incorrect compiler
|
|||
|
flags for the \courier{xlc\} compiler on newer IBM processors. This
|
|||
|
is fixed in FFTW 2.1.4.
|
|||
|
|
|||
|
\comment Here it ends!
|
|||
|
|